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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs78738382 chr8:60093913 A/C PRHOXNB chr13:28552243-28562774:- 0.66 9.08 2.65E-12 Box Plot
ACC rs7874032 chr9:5918513 C/G DSC1 chr18:28709199-28742819:- 0.98 8.88 5.42E-12 Box Plot
ACC rs7874317 chr9:96551733 G/T PLEKHA7 chr11:16798864-17035990:- 1.1 7.56 6.36E-10 Box Plot
ACC rs78749123 chr1:233177243 A/G PRHOXNB chr13:28552243-28562774:- 0.57 7.83 2.41E-10 Box Plot
ACC rs78793828 chr4:14068261 A/G CACNG5 chr17:64831235-64881603:+ 1.27 7.71 3.6E-10 Box Plot
ACC rs78807265 chr20:39461377 G/A GAGE2D chrX:49207160-49214420:+ 0.8 7.93 1.65E-10 Box Plot
ACC rs78811052 chr11:6477443 T/C PRHOXNB chr13:28552243-28562774:- 0.72 10.73 8.63E-15 Box Plot
ACC rs78823375 chr11:85674478 A/G GPR128 chr3:100328433-100414323:+ 1.02 8.1 8.75E-11 Box Plot
ACC rs78839896 chr4:154571569 C/T PRHOXNB chr13:28552243-28562774:- 0.65 8.51 2.01E-11 Box Plot
ACC rs78865829 chr6:86403850 TTCTTG/T DDX53 chrX:23018078-23021706:+ 0.71 7.75 3.13E-10 Box Plot
ACC rs78901882 chr6:88686676 C/T PRHOXNB chr13:28552243-28562774:- 0.67 9.05 2.93E-12 Box Plot
ACC rs78953763 chr2:142864800 G/T PRHOXNB chr13:28552243-28562774:- 0.57 7.64 4.79E-10 Box Plot
ACC rs79005996 chr22:42363812 G/A GAGE2D chrX:49207160-49214420:+ 0.85 9.02 3.19E-12 Box Plot
ACC rs79043363 chr5:120321791 T/C GAGE2D chrX:49207160-49214420:+ 1.22 11.62 4.6E-16 Box Plot
ACC rs7905000 chr10:61342102 C/T GAGE2D chrX:49207160-49214420:+ 0.5 8.14 7.77E-11 Box Plot